I think E[POD]Bot uses PXP and PWF Waypoints, download the Full package and I sopose extract them to epodbot waypoints folder, I wouldn't recomend Overwriting waypoints that are given in the Botinstallation.
E[POD]Bot waypoints I think are different, because the bots jump around corners and probably use different brand of waypoints, but if you want the jumping around corners to stop go right ahead and feel free to overwrite them, but I would recomend saving your original waypoints somewhere else and then let the installers do the rest.