This sounds to me that the plugins.ini was edited.
Code:
win32 addons/amxmodx/dlls/amxmodx_mm.dll
//linux addons/amxmodx/dlls/amxmodx_mm_i386.so
win32 addons/podbot/podbot_mm.dll
//linux addons/podbot/podbot_mm_i386.so
//win32 addons\yapb\dlls\yapb.dll // added by bot installer
This is what mine looks like, your's has a ton of other stuff. Make sure the podbot and amx aren't changed any.
I'm sure you know about if your server is windows you put // in front of linux and // infront of windows if you run a linux server.